conductor(deob_pass3): mark all 3 phases complete; awaiting user review for status=completed

conductor(deob_pass3): PASS3_REPORT + end-of-track completion report
conductor(deob_pass3): cluster D + synthesis - cs336, creikey_dl_cv, synthesis (Python)
2026-06-23 21:11:02 -04:00 · 2026-06-23 21:10:51 -04:00 · 2026-06-23 21:09:14 -04:00 · 2026-06-23 21:07:44 -04:00 · 2026-06-23 21:05:45 -04:00 · 2026-06-23 21:04:11 -04:00
2000 changed files with 192916 additions and 256 deletions
@@ -31,3 +31,4 @@ temp_old_gui.py
 conductor/tracks/video_analysis_*/artifacts/*.mp4
 conductor/tracks/video_analysis_*/artifacts/*.vtt
 # video.log intentionally committed (small text, useful for debugging)
 conductor/tracks/video_analysis_deob_warmup_20260621/samples
@@ -65,6 +65,10 @@ Tracks that are unblocked and ready to start. Ordered by **dependency** (blocked
 | 26 | A (research) | [Video Analysis Campaign (12 videos, 5 clusters, Pass 1 of 3)](#track-video-analysis-campaign-20260621) | spec Γ£ô, plan Γ£ô, **14 folders scaffolded (1 umbrella + 12 children + 1 synthesis); Pass 1 of 3 (information extraction); awaiting Phase 0 tooling prerequisites (yt-dlp, cv2, imagehash install in repo venv)**; 12 children in execution order: CS229 ΓåÆ math foundations ΓåÆ Platonic/geometric ΓåÆ biological ΓåÆ CS336 ΓåÆ applied capstone; per-video target: 1000-10000 LOC markdown deep-dive report | (none ΓÇö independent; **NEW 2026-06-21**; multi-track research campaign; 12 videos across 5 clusters (E: Stanford >1hr; A: math foundations; B: Platonic AI; C: biological/cognitive; D: applied); multi-pass handoff to Pass 2 (de-obfuscation via user's math encoding ΓÇö USER must rediscover notation before Pass 2 starts) + Pass 3 (projection to applied domain ΓÇö USER must articulate "own caveats" before Pass 3 starts); **lossless preservation directive**: Pass 1 artifacts must NOT be over-summarized (data cascades to Pass 2/3); **2 E-cluster videos failed oEmbed 401** (yt-dlp may still work; verify in Phase 1); reusable tooling: 5 TDD scripts in `scripts/video_analysis/` (download_video, extract_transcript, extract_keyframes, ocr_frames, synthesize_report) |
 | 27 | A | [Phase 2/4/5 Call-Site Completion (post any_type_componentization)](#track-phase2-4-5-call-site-completion-20260621) | spec ✓, plan ✓, metadata ✓, state ✓, **SHIPPED 2026-06-21** with all 4 phases complete (6a broadcast fix + 6b ChatMessage + 6d UsageStats no-op + 6e Phase 3 cost analysis); 5 atomic commits on tier2 branch; broadcast() TypeError fixed; 20/20 provider tests pass; all 3 audits --strict pass; unblocks `code_path_audit_20260607`; report at `docs/reports/TRACK_COMPLETION_phase2_4_5_call_site_completion_20260621.md` | any_type_componentization_20260621 (parent; shipped 2026-06-21 with 48/89 sites + 1 runtime bug) | (NEW 2026-06-21; bugfix + refactor + test-infrastructure + Tier 2 cost analysis; **Phase 6a COMPLETE**: fixed 2 broadcast() callers in `src/app_controller.py:1849` + `src/events.py:115` (gui_2.py had no callers, verified by grep); added `tests/test_websocket_broadcast_regression.py` 4/4 pass; **Phase 6b COMPLETE**: migrated `_send_grok` + `_send_minimax` + `_send_llama` to `ChatMessage` API; 20/20 provider tests pass; **Phase 6d NO-OP**: `NormalizedResponse` already uses `UsageStats` throughout `openai_compatible.py`; **Phase 6e COMPLETE**: produced `docs/reports/PHASE3_TIER2_ANALYSIS.md` (253 lines; Tier 2 authoritative version); measured 104 history sites (vs Tier 1 estimate 112); discovered 3 hidden cross-references (_strip_private_keys, _extract_minimax_reasoning, _send_llama_native); refined cost estimates: anthropic 35-65us/turn (Tier 1 said 8-15), grok/qwen/llama ~400ns (Tier 1 said 2-8us); **deferred**: Phase 3 call-site migration (104 sites in ai_client.py) -> separate track post-audit; cross-phase coupling -> separate track; `audit_tier2_leaks.py` sandbox-pollution -> infra track; **does NOT merge `tier2/any_type_componentization_20260621` branch** per Tier 2 reconnaissance framing; **does NOT archive `conductor/tracks/phase2_4_5_call_site_completion_20260621/`** - user handles that) |
 | 28 | A | [Any-Type Componentization (Promote dict[str, Any] to dataclass(frozen=True))](#track-any-type-componentization-promote-dictstr-any-to-dataclassfrozentrue) | spec Γ£ô, plan Γ£ô, metadata Γ£ô, state Γ£ô, **shipped 2026-06-21** with 48/89 fat-struct sites promoted (Phases 1, 2, 4, 5 complete); Phase 3 (`provider_state` call-site migration in `ai_client.py`) DEFERRED to a separate track; 1 runtime bug surfaced (`HookServer.broadcast()` callers in `app_controller.py` + `events.py`); not merged; reconnaissance for `code_path_audit_20260607`; tier2 branch at 24 commits | (none ΓÇö independent; **NEW 2026-06-21**; refactor + ai-readability + type-safety; ships: 3 new modules (`src/mcp_tool_specs.py`, `src/openai_schemas.py`, `src/provider_state.py`); 2 new audit scripts (`scripts/audit_dataclass_coverage.py` + `--strict` mode); styleguide `conductor/code_styleguides/type_aliases.md` ┬º12 "When to Promote TypeAlias to dataclass"; type-registry regenerated; 130+ tests pass; **input artifact**: `docs/reports/ANY_TYPE_AUDIT_20260621.md`; **handoff docs**: `docs/handoffs/PROMPT_FOR_TIER_1.md` + `HANDOFF_FOLLOWUP_TRACK_FROM_any_type_componentization.md` + `HANDOFF_CODE_PATH_AUDIT_FROM_any_type_componentization.md`) |
 | 29 | A (research) | [Video Analysis De-obfuscation Campaign (Pass 2 of 3)](#track-video-analysis-deob-20260621) | spec ✓, plan ✓, **5 folders scaffolded (1 umbrella + 1 warmup + 3 phase children); Pass 2 of 3 (de-obfuscation)**; **awaits USER action item**: gather 3-10 samples of past de-obfuscation notes into `video_analysis_deob_warmup_20260621/samples/`; warmup produces `report.md` + `prompt_template.md`; lexicon child refines; pilot child validates on 2 videos (`cs229_building_llms` + `entropy_epiplexity`); apply child applies to 10 + synthesis; multi-layer deliverable per video: translation + replacement + decoder | (none — independent; **NEW 2026-06-21**; multi-track research campaign; **de-obfuscation philosophy**: constructive type theory + Wildberger-style finitism + boundedness for knowledge + cycles/iteration explicit + etymology-aware; 4 verification criteria (lossless, bounded, constructively typed, etymology-cited); supersedes Pass 1 spec §11.1; consumed by Pass 3 (projection to applied domain, future user-led); **load-bearing directive**: Pass 1 artifacts must remain lossless because Pass 2 de-obfuscation consumes them as raw input) |
 | 29a | A (research) | [Lexicon v2 Patch (Pass 2 Phase 1.5)](#track-lexicon-v2-patch-pass-2-phase-15-2026-06-23) | spec ✓, plan ✓, metadata ✓, state ✓, README ✓, V2_CHANGELOG ✓, **spec DRAFT pending user review**; targeted corrective pass after Pass 2 SHIPPED; 5 source files updated + 1 changelog; 8 corrections (L1-L8) + 3 DEFERRED refinements (R1, R4, R6) + 4 template notations (TN1-TN4: B default, C++ opt-in, Odin opt-in, Jai opt-in) + 2 `<<` / `>>` placements (<<1, <<2) + 1 per-language rendering section (<<3); encoding default changed from `float64` to placeholder scheme (`float` general, `integer` general, `Scalar` linear/geo/tensor alg, `float64` resolved); 76 terms in v2 (was 72); v1 state preserved in git history; 33 deliverables + 2 reports NOT re-processed (intermediate artifacts; Pass 3 will use v2) | `video_analysis_deob_apply_20260621` (SHIPPED 2026-06-23, commit 8f2e8a69) | (**NEW 2026-06-23**; **post-apply corrective pass**; not exhaustive; 7 atomic commits planned; Pass 3 (the C11/Python projection) is the next user-led track and will use v2; the 5 DEFERRED gaps are deferred to lexicon v3) |
 | 29b | A (research) | [C11 Reference (Pass 3 Sub-Track)](#track-c11-reference-pass-3-sub-track-2026-06-23) | spec ✓, plan ✓, metadata ✓, state ✓, README ✓, **in progress**; 4 cluster sub-reports + 1 main c11_convention.md + tracks.md update; PRIMARY sources = Pikuma duffle (9 headers) + forth bootslop attempt_1 (4 files) + forth references (2 files) + gte_hello (2 files); FALLBACK = raddebugger/src/base (5 headers); the C11 reference synthesizes the user's idiomatic C11 (byte-width types, underscore-suffixed type modifiers, hand-rolled DSL, memory ordering vocabulary, slice + arena, design-doc headers) with the raddbg fallback for patterns duffle doesn't cover (U64/S64, Vec2F32/Vec3S32, String8, force_inline, etc.); the per-language `<<` / `>>` rendering for C11 is included (much_less / much_greater / weakly_coupled with tolerance) | `video_analysis_deob_apply_20260621` (SHIPPED 2026-06-23) + `video_analysis_deob_lexicon_v2_20260623` (SHIPPED 2026-06-23) | (**NEW 2026-06-23**; Pass 3 sub-track; 6 atomic commits planned; hands off to Pass 3 as the primary C11 style guide; per user 2026-06-23: 'use the forth bootslop and pikuma then. Use raddbg's base for stuff missing. otherwise go for jai/odin.') |
 | 29c | A (research) | [Pass 3 — C11/Python Projection (the final phase)](#track-pass-3-c11python-projection-2026-06-23) | spec ✓, plan ✓, metadata ✓, state ✓, README ✓, TIER2_STARTER ✓, **spec DRAFT pending user review**; projects v2-deobfuscated outputs to C11 or Python code that conveys each video's content; 11 videos (10 C11 default + 2 Python + 1 synthesis); per-video deliverables: C11 (.c + .h) or Python (.py) + 3-4 markdown docs (translation, decoder, notes); 4 + 3 verification criteria met per the v2 lexicon; per-language `<<` / `>>` rendering (much_less / much_greater / weakly_coupled); encoding placeholder scheme (float / integer / Scalar / float64); code may or may not run (per user 2026-06-23); Tier 2 holds full context + 4 parallel Tier 3 sub-agents (per cluster) | `video_analysis_deob_apply_20260621` (SHIPPED) + `video_analysis_deob_lexicon_v2_20260623` (SHIPPED) + `video_analysis_deob_c11_reference_20260623` (SHIPPED) | (**NEW 2026-06-23**; **Pass 3 of 3**; the FINAL phase of the 3-pass research campaign; ~35-58 atomic commits planned; 11 videos × 3-5 deliverables = 33-55 files + 2 global reports; the user's 'ok awesome' (or similar) after the deliverables is the formal close of the 3-pass campaign) |
 **Note on numbering:** the legacy file used `0a`, `0b`, `0c`... and `0d`, `0e`, `0f`, `0g` for tracks created 2026-06-06+. This is the **git-blame sort order**, not a logical execution order. The new structure re-orders by dependency.
@@ -132,6 +132,12 @@ After all 12 child tracks ship, the synthesis track consumes their `report.md` +
 Synthesis track scaffolded in init commit c1a15c45. Execution is via separate Tier 2 dispatch after all children ship.
 **STATUS:** SHIPPED 2026-06-21. commit 25423549 (synthesis), 10c1eef9 (state update).
 - per_video_summary.md: 80 lines, 18KB (12 entries × ~200 words)
 - report.md: 1031 lines, 88KB (6 FR7 sections + 8 expansion sections)
 - TRACK_COMPLETION_video_analysis_synthesis_20260621.md: shipped
 - Decision: direct Tier 2 synthesis (no Tier 3 delegation); cross-cluster integration across 12 child reports (~13000 LOC) exceeds Tier 3 effective context window. Rationale documented in state.toml [synthesis_decision].
 ---
 ## Phase 4: Campaign Closeout (brief)
@@ -141,6 +147,8 @@ Synthesis track scaffolded in init commit c1a15c45. Execution is via separate Ti
 - [ ] Move umbrella + 13 children to `conductor/archive/`.
 - [ ] Update `conductor/chronology.md` with 14 new rows.
 **STATUS:** DEFERRED to user action. All 13 tracks shipped; closeout is a user-driven operation. The synthesis track itself is fully complete; umbrella closeout is a finalization step (archival, README, chronology).
 ---
 ## Verification (gate per workflow.md)
@@ -341,21 +341,33 @@ This track does not modify the manual_slop application architecture. It produces
 ## 11. Coordination with Future Passes (load-bearing)
-### 11.1 Pass 2 (de-obfuscation via user's math encoding notation) — handoff contract
+### 11.1 Pass 2 (de-obfuscation via user's constructive type-theoretic re-encoding) — handoff contract (superseded 2026-06-21)
-**Pass 2 will consume:**
+**This section is superseded by the dedicated Pass 2 track at [`conductor/tracks/video_analysis_deob_20260621/spec.md`](../video_analysis_deob_20260621/spec.md) (umbrella) + the warmup precursor at [`conductor/tracks/video_analysis_deob_warmup_20260621/spec.md`](../video_analysis_deob_warmup_20260621/spec.md).**
 **TL;DR.** Pass 2 is now a 5-folder campaign (1 warmup + 1 umbrella + 3 phase children), not a single "USER must rediscover" task. The user's "compress/decompress math info" encoding is now an **evidence-based lexicon** derived from the user's past de-obfuscation samples (collected via the warmup track), not a "user must rediscover" action item. The 3-layer deliverable per video (translation / replacement / decoder) replaces the single `deobfuscated/<slug>.md` originally described here.
 **Pass 2 will consume (unchanged):**
 - `transcript.json` (every child track's `artifacts/transcript.json`)
 - `frames/*.jpg` (every child track's `artifacts/frames/`)
 - `ocr.md` (every child track's `artifacts/ocr.md`)
- `report.md` (every child track's deep-dive report)
+- `report.md` (every child track's deep-dive report — the primary input)
 - `summary.md` (every child track's summary)
-**Pass 2's input encoding (user action item — pre-Pass-2):**
+**Pass 2's input (revised 2026-06-21):**
- The user must rediscover/redefine their "compress/decompress math info" encoding notation.
+- The user provides 3-10 samples of their past de-obfuscation notes in `samples/`. The warmup track (`video_analysis_deob_warmup_20260621/`) produces the initial lexicon + LLM prompt template.
- This may be referenced in `conductor/tracks/intent_dsl_survey_20260612/` and other DSL-related track work; the user has prior art but it needs to be located.
+- The user's constructive type theory framing is documented at [`video_analysis_deob_20260621/spec.md`](../video_analysis_deob_20260621/spec.md) §1.1.
 - Without this encoding system, Pass 2 cannot start.
-**Pass 2 output:** a `deobfuscated/<slug>.md` per video + a `deobfuscated/synthesis.md` cross-cutting.
+**Pass 2 output (revised):** 3-layer deliverable per video + 3-layer deliverable for the cross-cutting synthesis. For each: `<slug>_translation.md` (side-by-side), `<slug>_deobfuscated.md` (replacement), `<slug>_decoder.md` (per-term decoder with form anchor + etymology + definition history).
 **5-folder structure:**
 - `video_analysis_deob_20260621/` — umbrella (coordinates the 3 phase children)
 - `video_analysis_deob_warmup_20260621/` — precursor (user samples → lexicon + prompt template)
 - `video_analysis_deob_lexicon_20260621/` — Phase 1 (refine the warmup's draft into a codified operational spec)
 - `video_analysis_deob_pilot_20260621/` — Phase 2 (apply to 2 videos: `cs229_building_llms` + `entropy_epiplexity`; capture refinements)
 - `video_analysis_deob_apply_20260621/` — Phase 3 (apply to the remaining 10 + synthesis)
 See the umbrella spec for the full design: §1 (philosophy), §2 (current state), §3 (goals), §4 (functional requirements), §6 (out of scope), §10 (user directives), §11 (see also).
 ### 11.2 Pass 3 (projection to applied domain) — handoff contract
@@ -5,23 +5,23 @@
 track_id = "video_analysis_campaign_20260621"
 name = "Video Analysis Campaign (12 videos, 5 clusters, 3 passes)"
 status = "active"
-current_phase = 2  # Phase 2 init complete; per-child execution is separate Tier 2 dispatches
+current_phase = 3  # Phase 0+1+2+3 complete; Phase 4 closeout deferred to user
 last_updated = "2026-06-21"
 [blocked_by]
 # Independent umbrella. No blockers.
 [blocks]
-# This umbrella blocks the synthesis track:
+# This umbrella blocked the synthesis track (now shipped):
-video_analysis_synthesis_20260621 = "planned"
+video_analysis_synthesis_20260621 = "shipped"
 # Each child track is "blocked_by" the umbrella + its own dependencies (none)
 [phases]
 phase_0 = { status = "completed", checkpointsha = "1c05305a", name = "Tooling Prerequisites (yt-dlp, cv2, imagehash, OCR backend)" }
 phase_1 = { status = "completed", checkpointsha = "548c4fef", name = "Reusable Tooling (5 scripts with TDD)" }
-phase_2 = { status = "in_progress", checkpointsha = "c1a15c45", name = "Per-Child Tracks (12 videos, 5-phase pipeline each) - INIT DONE; per-child execution is separate Tier 2 dispatches" }
+phase_2 = { status = "completed", checkpointsha = "0c58a97c", name = "Per-Child Tracks (12 videos, 5-phase pipeline each) - ALL 12 SHIPPED" }
-phase_3 = { status = "pending", checkpointsha = "", name = "Synthesis Track (blocked by all 12 children)" }
+phase_3 = { status = "completed", checkpointsha = "25423549", name = "Synthesis Track (blocked by all 12 children) - SHIPPED" }
-phase_4 = { status = "pending", checkpointsha = "", name = "Campaign Closeout (README update, end-of-track report, archive, chronology)" }
+phase_4 = { status = "pending", checkpointsha = "", name = "Campaign Closeout (README update, end-of-track report, archive, chronology) - DEFERRED to user" }
 [tasks]
 # Phase 0 tasks
@@ -43,35 +43,35 @@ t1_9 = { status = "completed", commit_sha = "548c4fef", description = "Write tes
 t1_10 = { status = "completed", commit_sha = "548c4fef", description = "Implement synthesize_report.py (green). 5 tests passing." }
 # Phase 2 tasks (12 child tracks - one entry each; details in child plans)
-t2_1 = { status = "pending", commit_sha = "", description = "Child 1: video_analysis_cs229_building_llms_20260621 - verify yt-dlp access (oEmbed failed 401), execute 5-phase pipeline, ship report.md (1000-10000 LOC) + summary.md" }
+t2_1 = { status = "completed", commit_sha = "fd95ea48", description = "Child 1: video_analysis_cs229_building_llms_20260621 - SHIPPED" }
-t2_2 = { status = "pending", commit_sha = "", description = "Child 2: video_analysis_probability_logic_20260621 - execute 5-phase pipeline" }
+t2_2 = { status = "completed", commit_sha = "", description = "Child 2: video_analysis_probability_logic_20260621 - SHIPPED" }
-t2_3 = { status = "pending", commit_sha = "", description = "Child 3: video_analysis_entropy_epiplexity_20260621 - execute 5-phase pipeline" }
+t2_3 = { status = "completed", commit_sha = "", description = "Child 3: video_analysis_entropy_epiplexity_20260621 - SHIPPED" }
-t2_4 = { status = "pending", commit_sha = "", description = "Child 4: video_analysis_score_dynamics_giorgini_20260621 - execute 5-phase pipeline" }
+t2_4 = { status = "completed", commit_sha = "", description = "Child 4: video_analysis_score_dynamics_giorgini_20260621 - SHIPPED" }
-t2_5 = { status = "pending", commit_sha = "", description = "Child 5: video_analysis_platonic_intelligence_kumar_20260621 - execute 5-phase pipeline" }
+t2_5 = { status = "completed", commit_sha = "", description = "Child 5: video_analysis_platonic_intelligence_kumar_20260621 - SHIPPED" }
-t2_6 = { status = "pending", commit_sha = "", description = "Child 6: video_analysis_free_lunches_levin_20260621 - execute 5-phase pipeline" }
+t2_6 = { status = "completed", commit_sha = "", description = "Child 6: video_analysis_free_lunches_levin_20260621 - SHIPPED" }
-t2_7 = { status = "pending", commit_sha = "", description = "Child 7: video_analysis_generic_systems_fields_20260621 - execute 5-phase pipeline" }
+t2_7 = { status = "completed", commit_sha = "", description = "Child 7: video_analysis_generic_systems_fields_20260621 - SHIPPED" }
-t2_8 = { status = "pending", commit_sha = "", description = "Child 8: video_analysis_brain_counterintuitive_20260621 - execute 5-phase pipeline" }
+t2_8 = { status = "completed", commit_sha = "", description = "Child 8: video_analysis_brain_counterintuitive_20260621 - SHIPPED" }
-t2_9 = { status = "pending", commit_sha = "", description = "Child 9: video_analysis_neural_dynamics_miller_20260621 - execute 5-phase pipeline" }
+t2_9 = { status = "completed", commit_sha = "", description = "Child 9: video_analysis_neural_dynamics_miller_20260621 - SHIPPED" }
-t2_10 = { status = "pending", commit_sha = "", description = "Child 10: video_analysis_multiscale_hoffman_20260621 - execute 5-phase pipeline" }
+t2_10 = { status = "completed", commit_sha = "", description = "Child 10: video_analysis_multiscale_hoffman_20260621 - SHIPPED" }
-t2_11 = { status = "pending", commit_sha = "", description = "Child 11: video_analysis_cs336_architectures_20260621 - verify yt-dlp access (oEmbed failed 401), execute 5-phase pipeline" }
+t2_11 = { status = "completed", commit_sha = "", description = "Child 11: video_analysis_cs336_architectures_20260621 - SHIPPED" }
-t2_12 = { status = "pending", commit_sha = "", description = "Child 12: video_analysis_creikey_dl_cv_20260621 - execute 5-phase pipeline" }
+t2_12 = { status = "completed", commit_sha = "", description = "Child 12: video_analysis_creikey_dl_cv_20260621 - SHIPPED" }
 # Phase 3 tasks (synthesis)
 t3_1 = { status = "completed", commit_sha = "c1a15c45", description = "Initialize video_analysis_synthesis_20260621 (spec.md + metadata.json + state.toml scaffolded)" }
-t3_2 = { status = "pending", commit_sha = "", description = "Execute synthesis: consume 12 children's report.md + summary.md, produce per_video_summary.md + report.md" }
+t3_2 = { status = "completed", commit_sha = "25423549", description = "Execute synthesis: consume 12 children's report.md + summary.md, produce per_video_summary.md (80 lines, 18KB) + report.md (1031 lines, 88KB)" }
-# Phase 4 tasks (closeout)
+# Phase 4 tasks (closeout) - DEFERRED to user
 t4_1 = { status = "pending", commit_sha = "", description = "Update umbrella README.md with final statuses (all 12 children + synthesis shipped)" }
 t4_2 = { status = "pending", commit_sha = "", description = "Write end-of-track report at docs/reports/TRACK_COMPLETION_video_analysis_campaign_20260621.md" }
 t4_3 = { status = "pending", commit_sha = "", description = "Move umbrella + 13 children to conductor/archive/ per project convention" }
 t4_4 = { status = "pending", commit_sha = "", description = "Update conductor/chronology.md with 14 new rows" }
 [verification]
-# These flip to true as the campaign progresses
+# All flipped to true except closeout (user-driven)
 tooling_installed = true
 scripts_tdd_complete = true
-all_12_children_shipped = false
+all_12_children_shipped = true
-synthesis_shipped = false
+synthesis_shipped = true
 end_of_track_report_committed = false
 future_pass_hooks_intact = true
--- a/Show More
+++ b/Show More