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manual_slop/src/rag_engine.py
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ed 644d88ab93 fix(rag): break recursion in _validate_collection_dim
The wipe path called self._init_vector_store() which re-invoked
_validate_collection_dim, causing infinite recursion (RecursionError)
when the dim mismatch test ran with the mock embedding provider.

Re-initialize the vector store INLINE after the rmtree wipe so the
fresh collection is created without going through the validator
again.
2026-06-09 14:47:01 -04:00

385 lines
13 KiB
Python

import asyncio
import copy
import json
import os
import sys
from typing import List, Dict, Any, Optional
from src import ai_client
from src import models
from src import mcp_client
from src.file_cache import ASTParser
_SENTENCE_TRANSFORMERS = None
_GOOGLE_GENAI = None
_CHROMADB = None
LOCAL_RAG_INSTALL_HINT = "Local RAG embeddings require sentence-transformers. Install with manual_slop[local-rag] to use local embeddings."
def _get_sentence_transformers():
global _SENTENCE_TRANSFORMERS
if _SENTENCE_TRANSFORMERS is None:
try:
from sentence_transformers import SentenceTransformer
_SENTENCE_TRANSFORMERS = SentenceTransformer
except ModuleNotFoundError as e:
if e.name == "sentence_transformers":
raise ImportError(LOCAL_RAG_INSTALL_HINT) from e
raise
except Exception as e:
sys.stderr.write(f"FAILED to import sentence_transformers: {e}\n")
sys.stderr.flush()
raise e
return _SENTENCE_TRANSFORMERS
def _get_google_genai():
global _GOOGLE_GENAI
if _GOOGLE_GENAI is None:
from google import genai
from google.genai import types
_GOOGLE_GENAI = (genai, types)
return _GOOGLE_GENAI
def _get_chromadb():
global _CHROMADB
if _CHROMADB is None:
import chromadb
from chromadb.config import Settings
_CHROMADB = (chromadb, Settings)
return _CHROMADB
class BaseEmbeddingProvider:
def embed(self, texts: List[str]) -> List[List[float]]:
raise NotImplementedError()
class LocalEmbeddingProvider(BaseEmbeddingProvider):
def __init__(self, model_name: str = 'all-MiniLM-L6-v2'):
ST = _get_sentence_transformers()
self.model = ST(model_name)
def embed(self, texts: List[str]) -> List[List[float]]:
embeddings = self.model.encode(texts)
return embeddings.tolist()
class GeminiEmbeddingProvider(BaseEmbeddingProvider):
def __init__(self, model_name: str = 'gemini-embedding-001'):
self.model_name = model_name
def embed(self, texts: List[str]) -> List[List[float]]:
google_module = _get_google_genai()
if google_module is None:
raise ImportError("google-genai is not installed")
genai_pkg, types = google_module
ai_client._ensure_gemini_client()
client = ai_client._gemini_client
if not client:
raise ValueError("Gemini client not initialized")
res = client.models.embed_content(
model = self.model_name,
contents = texts,
config = types.EmbedContentConfig(task_type="RETRIEVAL_DOCUMENT")
)
return [e.values for e in res.embeddings]
class RAGEngine:
def __init__(self, config: models.RAGConfig, base_dir: str = "."):
self.config = copy.deepcopy(config)
self.base_dir = base_dir
self.client = None
self.collection = None
self.embedding_provider = None
if not self.config.enabled: return
self._init_embedding_provider()
self._init_vector_store()
def _init_embedding_provider(self):
if self.config.embedding_provider == 'gemini':
self.embedding_provider = GeminiEmbeddingProvider()
elif self.config.embedding_provider == 'local':
self.embedding_provider = LocalEmbeddingProvider()
else:
raise ValueError(f"Unknown embedding provider: {self.config.embedding_provider}")
def _init_vector_store(self):
vs_config = self.config.vector_store
if vs_config.provider == 'chroma':
# Use a collection-specific path to avoid dimension conflicts and locks between tests
db_path = os.path.abspath(os.path.join(self.base_dir, ".slop_cache", f"chroma_{vs_config.collection_name}"))
os.makedirs(db_path, exist_ok=True)
chroma_module = _get_chromadb()
if chroma_module is None:
raise ImportError("chromadb is not installed")
chromadb, Settings = chroma_module
self.client = chromadb.PersistentClient(path=db_path)
self.collection = self.client.get_or_create_collection(name=vs_config.collection_name)
self._validate_collection_dim()
elif vs_config.provider == 'mock':
self.client = "mock"
self.collection = "mock"
else:
raise ValueError(f"Unknown vector store provider: {vs_config.provider}")
def _validate_collection_dim(self) -> None:
"""
Detect dimension mismatch between an existing collection's vectors and
the current embedding provider's output. When mismatched (e.g. the user
switched from Gemini 3072-dim to local 384-dim, or vice versa), the
collection is wiped at the directory level (not via delete_collection,
which can fail on corrupted state in chromadb 1.5.x with
"RustBindingsAPI object has no attribute bindings") so the next
index pass populates it with the correct dim. Prevents silent
corruption that would later surface as a search error
("Collection expecting embedding with dimension of X, got Y") and
hang live_gui tests.
[C: tests/test_rag_engine.py:test_rag_collection_dim_mismatch_recreates_collection, tests/test_rag_engine.py:test_rag_collection_dim_match_preserves_collection]
"""
if self.collection is None or self.collection == "mock" or self.embedding_provider is None:
return
try:
res = self.collection.get(limit=1, include=["embeddings"])
except Exception as e:
sys.stderr.write(f"RAG: Failed to read collection for dim check: {e}\n")
sys.stderr.flush()
return
if not res:
return
embeddings = res.get("embeddings") if isinstance(res, dict) else None
if embeddings is None:
return
# Use numpy-safe emptiness check (numpy 2.x disallows truthiness on empty arrays)
try:
if len(embeddings) == 0:
return
except TypeError:
return
existing_dim = len(embeddings[0])
try:
expected_dim = len(self.embedding_provider.embed(["__rag_dim_check__"])[0])
except Exception as e:
sys.stderr.write(f"RAG: Failed to compute expected dim: {e}\n")
sys.stderr.flush()
return
if existing_dim == expected_dim:
return
sys.stderr.write(
f"RAG: Collection '{self.collection.name}' dim mismatch "
f"(existing={existing_dim}, expected={expected_dim}). "
f"Wiping chroma dir to prevent silent corruption.\n"
)
sys.stderr.flush()
# Wipe the entire chroma dir (not via delete_collection which
# fails on corrupted state in chromadb 1.5.x with
# "RustBindingsAPI object has no attribute bindings"). Rmtree is
# reliable and re-creates a fresh empty collection.
# NOTE: we re-initialize the vector store INLINE (not via
# _init_vector_store) to avoid infinite recursion, since
# _init_vector_store calls _validate_collection_dim.
import shutil as _shutil
# Close the chroma client first to release file handles. Without
# this, rmtree fails with WinError 32 on Windows.
try:
if hasattr(self, 'client') and self.client and self.client != "mock":
self.client.close()
except Exception:
pass
self.client = None
self.collection = None
if hasattr(self, 'base_dir') and self.base_dir:
db_path = os.path.abspath(os.path.join(self.base_dir, ".slop_cache", f"chroma_{self.config.vector_store.collection_name}"))
if os.path.isdir(db_path):
try:
_shutil.rmtree(db_path)
except Exception as e:
sys.stderr.write(f"RAG: Failed to wipe chroma dir: {e}\n")
sys.stderr.flush()
# Re-initialize the vector store inline (no recursion).
vs_config = self.config.vector_store
if vs_config.provider == 'chroma':
from src import rag_engine as _re_self
os.makedirs(db_path, exist_ok=True)
chroma_module = _get_chromadb()
if chroma_module is None:
raise ImportError("chromadb is not installed")
chromadb, _Settings = chroma_module
self.client = chromadb.PersistentClient(path=db_path)
self.collection = self.client.get_or_create_collection(name=vs_config.collection_name)
elif vs_config.provider == 'mock':
self.client = "mock"
self.collection = "mock"
def is_empty(self) -> bool:
if not self.config.enabled:
return True
if self.config.vector_store.provider == 'mock' or self.collection == "mock":
return True
if self.collection is None:
return True
return self.collection.count() == 0
def add_documents(self, ids: List[str], texts: List[str], metadatas: Optional[List[Dict[str, Any]]] = None):
"""
[C: tests/test_rag_engine.py:test_rag_engine_chroma]
"""
if not self.config.enabled or self.collection == "mock":
return
embeddings = self.embedding_provider.embed(texts)
self.collection.upsert(
ids = ids,
embeddings = embeddings,
documents = texts,
metadatas = metadatas
)
def _chunk_text(self, content: str) -> List[str]:
"""Character-based chunking with overlap."""
chunks = []
if not content:
return chunks
chunk_size = self.config.chunk_size
overlap = self.config.chunk_overlap
start = 0
while start < len(content):
end = start + chunk_size
chunks.append(content[start:end])
if end >= len(content):
break
start += (chunk_size - overlap)
return chunks
def _chunk_code(self, content: str, file_path: str) -> List[str]:
"""AST-aware chunking for Python code."""
try:
parser = ASTParser("python")
tree = parser.parse(content)
chunks = []
for node in tree.root_node.children:
if node.type in ("function_definition", "class_definition"):
chunks.append(content[node.start_byte:node.end_byte])
if not chunks or len(content) < self.config.chunk_size:
return self._chunk_text(content)
return chunks
except Exception:
return self._chunk_text(content)
def index_file(self, file_path: str):
"""Reads, chunks, and indexes a file into the vector store."""
if not self.config.enabled or self.collection == "mock":
return
full_path = os.path.join(self.base_dir, file_path)
if not os.path.exists(full_path):
# CWD fallback: handle the case where base_dir was resolved to a
# parent directory (e.g. live_gui subprocess path resolution under
# batch test conditions) but the file is in the subprocess's CWD.
# The base_dir takes priority; this is a safety net for relative
# path resolution across the spawn CWD boundary.
cwd_path = os.path.join(os.getcwd(), file_path)
if os.path.exists(cwd_path):
full_path = cwd_path
else:
return
try:
mtime = os.path.getmtime(full_path)
except Exception:
return
try:
res = self.collection.get(where={"path": file_path}, limit=1, include=["metadatas"])
if res and res["metadatas"] and res["metadatas"][0]:
if res["metadatas"][0].get("mtime") == mtime:
return
except Exception:
pass
try:
with open(full_path, "r", encoding="utf-8", errors="ignore") as f:
content = f.read()
except Exception:
return
self.collection.delete(where={"path": file_path})
if file_path.lower().endswith(".py"):
chunks = self._chunk_code(content, file_path)
else:
chunks = self._chunk_text(content)
if not chunks:
return
ids = [f"{file_path}_{i}" for i in range(len(chunks))]
metadatas = [{"path": file_path, "chunk": i, "mtime": mtime} for i in range(len(chunks))]
self.add_documents(ids, chunks, metadatas)
def _search_mcp(self, query: str, top_k: int = 5) -> List[Dict[str, Any]]:
async def _async_search_mcp():
tool_name = self.config.vector_store.mcp_tool or "rag_search"
args = {"query": query, "top_k": top_k}
res_str = await mcp_client.async_dispatch(tool_name, args)
try:
data = json.loads(res_str)
if isinstance(data, list):
return data
elif isinstance(data, dict) and "results" in data:
return data["results"]
return []
except:
return []
return asyncio.run(_async_search_mcp())
def search(self, query: str, top_k: int = 5) -> List[Dict[str, Any]]:
"""
[C: tests/mock_concurrent_mma.py:main, tests/test_rag_engine.py:test_rag_engine_chroma]
"""
if not self.config.enabled: return []
if self.config.vector_store.provider == 'mcp': return self._search_mcp(query, top_k)
if self.collection == "mock": return []
query_embedding = self.embedding_provider.embed([query])[0]
results = self.collection.query(
query_embeddings = [query_embedding],
n_results = top_k
)
ret = []
if results and results["ids"] and results["ids"][0]:
for i in range(len(results["ids"][0])):
ret.append({
"id": results["ids"][0][i],
"document": results["documents"][0][i],
"metadata": results["metadatas"][0][i] if results["metadatas"] else {},
"distance": results["distances"][0][i] if "distances" in results and results["distances"] else 0.0
})
return ret
def delete_documents(self, ids: List[str]):
"""
[C: tests/test_rag_engine.py:test_rag_engine_chroma]
"""
if not self.config.enabled or self.collection == "mock":
return
self.collection.delete(ids=ids)
def get_all_indexed_paths(self) -> List[str]:
if not self.config.enabled or self.collection == "mock":
return []
res = self.collection.get(include=["metadatas"])
if not res or not res["metadatas"]:
return []
return list(set(m.get("path") for m in res["metadatas"] if m.get("path")))
def delete_documents_by_path(self, file_paths: List[str]):
if not self.config.enabled or self.collection == "mock":
return
for path in file_paths:
self.collection.delete(where={"path": path})