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ed 434b6d0d54 docs: reduce redundant content across files; map references to canonical sources
Per user 'a bunch of docs just committed had redundant content across
files. Can we do a reduction of that and instead map references to
other files?'

This commit reduces content duplication across 9 files. The
canonical sources are kept as detailed references; the other
files now point to them.

Reductions (table replaced with 'see canonical' reference):

1. data_oriented_design.md §9: the 4-dim memory table
   (canonical: conductor/code_styleguides/agent_memory_dimensions.md §0)

2. guide_agent_memory_dimensions.md §0: the 4-dim memory table
   (canonical: conductor/code_styleguides/agent_memory_dimensions.md §0)

3. guide_caching_strategy.md §1: the 12-layer model
   (canonical: conductor/code_styleguides/cache_friendly_context.md §1)

4. guide_ai_client.md 'Cache strategy' section: the 12-layer model recap
   (canonical: conductor/code_styleguides/cache_friendly_context.md §1)

5. guide_knowledge_curation.md §1: the 5 category file details
   (canonical: conductor/code_styleguides/knowledge_artifacts.md §1)

6. product-guidelines.md 'Memory Dimensions' section: the 4-dim table
   (canonical: conductor/code_styleguides/agent_memory_dimensions.md §0)

7. guide_mma.md '4 memory dimensions' section: the MMA scope table
   (canonical: conductor/code_styleguides/agent_memory_dimensions.md §0)

8. docs/AGENTS.md §0 + §5-§8: 4-dim table + caching/knowledge/RAG/
   feature flag tables (canonical: the per-topic styleguides in
   conductor/code_styleguides/)

9. AGENTS.md 'Code Styleguides' section: the 6-styleguide list
   (canonical: docs/AGENTS.md §2)

The principle: each piece of content has ONE source of truth; other
places point to it. The data-oriented way. Files retain their
narrative flow and the 'what this is' intros, but the detailed
tables are now in their canonical home.

Net effect: -2100 bytes across 9 files (without losing any
information - the canonical sources are unchanged). The
'cross-references' sections are kept; the duplicated content
is removed.
2026-06-12 14:10:30 -04:00
ed 35c6cca134 docs: agent workflow docs + regular docs (v2.3 surfacing)
Per user request 'use your remaining context to update agent workflow
docs and then regular docs based on what was discussed in this report',
this commit creates/updates 15 files derived from the v2.3 nagent
review (the 12 new nagent additions + the 4 memory dimensions
reframing + the cache strategy + the RAG discipline + the knowledge
harvest pattern).

Agent workflow docs (4 files):
- AGENTS.md (UPDATE): add @import line to canonical DOD + 'Code
  Styleguides' section pointing to the 6 new styleguides + new
  'Human-Facing Documentation' section pointing to ./docs/AGENTS.md
- conductor/workflow.md (UPDATE): new section 'Additions (2026-06-12)
  - the 12 patterns from the latest nagent corpus' with TDD
  protocols for knowledge harvest, cache ordering, compaction, RAG
  discipline
- conductor/product-guidelines.md (UPDATE): new sections 'Memory
  Dimensions (added 2026-06-12)' + 'See Also - Updated' with the
  6-styleguide catalog
- docs/AGENTS.md (NEW): the agent-facing mirror of docs/Readme.md
  (per the nagent CLAUDE.md pattern). 10 sections + the per-tier
  reading path + the 4 memory dimensions + the caching strategy +
  the knowledge harvest + the RAG discipline + the feature flags

Regular docs (11 files):
- 6 new styleguides (the convention catalog):
  * data_oriented_design.md: the canonical DOD reference (Tier
    0/1/2; 3 defaults to reject; 8 core defaults; 7-question
    simplification pass; 10-question self-check; 4 memory
    dimensions in Manual Slop context)
  * agent_memory_dimensions.md: the 4 memory dims (curation /
    discussion / RAG / knowledge) + when to use each + the
    boundaries
  * rag_integration_discipline.md: the conservative-RAG rule
    (opt-in, complement, provenance, no mutation, feature-gated,
    graceful failure)
  * cache_friendly_context.md: stable-to-volatile context
    ordering + the cache TTL GUI contract + the byte-comparison
    test
  * knowledge_artifacts.md: the knowledge harvest pattern
    (category files, provenance, sha256 ledger, digest
    regeneration, 'delete to turn off')
  * feature_flags.md: file presence vs config flags vs CLI flags
- 3 new project docs (the cross-cutting guides):
  * guide_agent_memory_dimensions.md: the cross-cutting guide on
    the 4 dims + the decision tree
  * guide_caching_strategy.md: caching across providers +
    stable-to-volatile ordering + cache TTL GUI + the byte-
    comparison test + the 5th provider (claude-code)
  * guide_knowledge_curation.md: the knowledge memory guide (4th
    dim) + the 5 category files + per-file notes + the digest +
    the ledger + the harvest workflow
- 2 existing doc updates:
  * guide_mma.md: new sections 'Delegation as context management'
    + 'The 4 memory dimensions (the MMA scope)'
  * guide_ai_client.md: new section 'Cache strategy and the 12-
    layer model' + the 5th provider (claude-code)

All files use the same style as the v2.3 review (the user's preferred
format): 7-column tables, no JSON, SSDL shape tags, forth/array
notation, file:line citations, ASCII sketches where useful. The
human Readme files (Readme.md, docs/Readme.md) are NOT modified
(per repeated user instruction).

The 5th provider (claude-code) is documented in guide_ai_client.md
+ the data_oriented_design.md references the nagent pattern as the
source of the canonical rules.

The cross-references are bidirectional: the 6 styleguides reference
the 3 project docs; the 3 project docs reference the 6 styleguides;
the 2 doc updates reference both; AGENTS.md + ./docs/AGENTS.md
provide the entry points.
2026-06-12 13:50:40 -04:00
ed ef476c1058 docs(ai_client): document Result API + deprecation 2026-06-11 23:35:27 -04:00
ed 88aea3199c docs(guides): document run_with_tool_loop, native Ollama, v2 matrix, PROVIDERS
Updates docs/guide_ai_client.md and docs/guide_models.md
to document the follow-up track's Phase 1-4 work:

guide_ai_client.md (added 3 sections + 1 inline note):
  - run_with_tool_loop shared helper (signature, the
    2 extensions for vendored call paths, the
    4 applied + 3 deferred vendors, audit script)
  - Native Ollama adapter (the dispatcher check in
    _send_llama, the think/images/thinking fields,
    the /api/chat endpoint difference)
  - V2 Capability Matrix (12 fields, GUI rendering,
    static vs runtime caps.local)
  - PROVIDERS Location (Phase 2 move, PEP 562 re-export)

guide_models.md (added 2 sections):
  - PROVIDERS Constant (location change + circular
    import rationale + audit)
  - V2 Capability Matrix (v2 field list, how to add
    a new v2 field per the HARD RULE on no new
    src/<thing>.py files)

These docs were previously stale; they still described the
v1 matrix only and the old 'inline tool loop' pattern.
Phase 5 t5_5 is the docs step that brings them in sync
with the current code.

Verification: 118/118 vendor+tool+provider+import-isolation
tests pass (no regressions; docs changes do not affect code)
2026-06-11 21:51:55 -04:00
ed 691dc584eb docs(phase-6): update ai_client+models guides; report + follow-up track setup
Phase 6 t6.1 + t6.2 (no archive per user directive):
- docs/guide_ai_client.md: update Overview to mention 8 providers (was 5);
  add 'Shared OpenAI-Compatible Helper' section explaining
  src/openai_compatible.py (NormalizedResponse, OpenAICompatibleRequest,
  send_openai_compatible, usage pattern); document the Qwen adapter
  and Llama multi-backend.
- docs/guide_models.md: update PROVIDERS list to 8 entries (was 5).
- conductor/tracks.md: update the Qwen track entry to reflect
  '50/79 tasks done; Phase 6 in progress; NOT archiving - has follow-up';
  add detailed status note pointing to the follow-up track + audit
  report.
- docs/reports/qwen_llama_grok_followup_audit_20260611.md: NEW report
  explaining why a follow-up is needed (7 categories of gaps; the
  Tech Lead's 'footnote for now' failure mode; the lessons learned).
- conductor/tracks/qwen_llama_grok_followup_20260611/: NEW follow-up
  track setup (spec.md, state.toml, metadata.json, TODO.md).
  5 phases: tool loop lift, PROVIDERS move, UX adaptations 2-9,
  local-first + matrix v2, Anthropic/Gemini/DeepSeek migration.

Phase 6 t6.3 (git mv to archive) and t6.4 (mark Recently Completed)
are NOT applied per user directive: 'we can then doc this we're not
archiving yet, if we have a follow up track I need this one to stay
up because there is still alot todo'.
2026-06-11 09:33:18 -04:00
ed 2e12b266e4 docs(mcp_client+ai_client): correct tool counts (15->18, 45->46)
- Total tool count: 45 -> 46 (per src/models.py:AGENT_TOOL_NAMES)
- Python AST tools: 15 -> 18 (3 structural mutators added:
  py_remove_def, py_add_def, py_move_def, py_region_wrap)
- py_get_symbol_info is fictional; replaced with the 4 actual
  structural mutator tools
- Cross-link from guide_ai_client.md updated
2026-06-10 20:02:01 -04:00
ed 07c1ed4928 docs(ai_client+api_hooks): lazy-loading + warmup endpoints (startup_speedup)
guide_ai_client.md:
- Add 'Module-Level Imports' section explaining that the 5 provider SDKs
  are NOT imported at module level; they're obtained via
  src.module_loader._require_warmed() after the WarmupManager loads them
  in the background. (Per startup_speedup_20260606: import src.ai_client
  went from ~1800ms to ~161ms.)

guide_api_hooks.md:
- Add 4 warmup endpoints to the endpoints table:
  /api/warmup_status, /api/warmup_wait?timeout=N,
  /api/warmup_canaries, /api/startup_timeline
- Add 'Warmup API' section with client methods + external script pattern
  (use get_warmup_wait() instead of time.sleep() race)
2026-06-10 20:00:37 -04:00
conductor-tier2 161ebb0da6 docs(fix): correct nav link case + relative-path level
Gitea (and any case-sensitive filesystem) was rendering the [Top]
nav links in /docs as broken because of two bugs:

1. Case-sensitivity: 22 links used '../README.md' (all-uppercase)
   but the actual file is 'docs/Readme.md' (capital R, lowercase
   rest). 21 guide_*.md nav bars were affected, plus 1 internal
   cross-link in Readme.md itself. Works on Windows (case-
   insensitive) but broken on Linux/Gitea.

   Fix: 22 occurrences across 22 files changed
   '../README.md' -> '../Readme.md'

2. Wrong relative-path level: 16 links used '../../conductor/...'
   from 'docs/guide_*.md' to reach 'conductor/'. This goes up 2
   levels to 'projects/', which doesn't exist. The correct path
   from 'docs/guide_*.md' to 'conductor/' is 1 level up
   ('../conductor/...'). 12 unique patterns across 10 files
   affected.

   Fix: 16 occurrences across 10 files changed
   '../../conductor/' -> '../conductor/'

3. Bonus: 1 planned-guide link in guide_context_curation.md
   referenced a never-written 'guide_context_presets.md'. The
   ContextPreset schema is now fully covered in the new
   'guide_context_aggregation.md' (per the 2026-06-08 docs
   refresh). Fix: link target updated.

No content was changed, only link paths. 24 files, 37 link
replacements, 37 deletions.

Verification:
- All .md links in docs/ now resolve to existing files
  (validated by path-resolution check from each file's directory)
- The 3 new guides from the previous docs refresh commit
  (guide_discussions.md, guide_state_lifecycle.md,
  guide_context_aggregation.md) had the case bug inherited from
  guide_architecture.md's existing nav pattern; their top-of-file
  nav bars are now correct
- The 21 pre-existing guide nav bars that had the same bug
  (all 21 of them, except the 3 that used the correct case:
  guide_mma.md, guide_simulations.md, guide_tools.md) are now
  also fixed
- Inter-guide links (e.g. [Discussions](guide_discussions.md))
  were not affected; they were always correct because both the
  link text and the actual filename are lowercase

This is a docs-only fix. No code modified.
2026-06-08 19:51:55 -04:00
conductor-tier2 ba05168493 docs(refresh): 3 new guides + cross-links from nagent_review
Per the docs Refresh Protocol (conductor/workflow.md), after a
reference/analysis track ships, the affected guides must be updated
to reflect new module structure or new conventions. The nagent_review
track (9cc51ca9) produced a deep-dive + 10 actionable takeaways that
named 3 documentation gaps in /docs. This commit fills them.

3 new guides (1,122 lines total):

1. guide_discussions.md (353 lines) — The Discussion system
   - 23-operation matrix: A1-A7 per-entry + B1-B11 discussion-level
     + C1-C5 undo/redo
   - Take naming convention (<base>_take_<n>), branching, promotion
   - User-managed role list (app.disc_roles)
   - Per-role filter linked to MMA persona focus
   - _disc_entries_lock thread-safety contract
   - Hook API session endpoints
   - Persistence: _flush_to_project, _flush_disc_entries_to_project,
     context_snapshot
   - 9 file:line refs into gui_2.py:3770-4260 + history.py

2. guide_state_lifecycle.md (375 lines) — Undo/redo + reset + state
   delegation
   - HistoryManager + UISnapshot (13 captured fields, 100-snapshot
     capacity, debounced change-detection at render frame)
   - _handle_reset_session (clears 30+ fields, replaces project,
     preserves active_project_path per the 2026-06-08 regression fix)
   - App.__getattr__/__setattr__ state delegation to Controller
   - 4-thread access pattern with 7 lock-protected regions
   - State persistence: in-memory vs project TOML vs config TOML
   - Hot-reload integration
   - Hook API registries (_predefined_callbacks, _gettable_fields)
   - 14 file:line refs into gui_2.py:1140-1170, history.py,
     app_controller.py:3286-3356

3. guide_context_aggregation.md (394 lines) — The aggregate.py
   pipeline
   - 3 aggregation strategies (auto, summarize, full)
   - 7 per-file view modes (full, summary, skeleton, outline,
     masked, custom, none)
   - Full FileItem schema (9 fields + __post_init__ normalizer)
     at models.py:510-559
   - ContextPreset schema and ContextPresetManager
   - Tier 3 worker variant (build_tier3_context with FuzzyAnchor
     re-resolution and focus-file handling)
   - force_full / auto_aggregate short-circuits
   - Cache strategy (static prefix + dynamic history)
   - 23 file:line refs into aggregate.py:36-518 + models.py:909-937

8 existing guides cross-linked to the 3 new guides and to the
nagent_review track:

- guide_gui_2.md           (+ See Also entries for discussions,
                           state lifecycle, context aggregation,
                           nagent_review report)
- guide_app_controller.md  (+ See Also entries for discussions,
                           state lifecycle, context aggregation,
                           nagent_review report)
- guide_context_curation.md (+ new See Also section pointing to
                            context aggregation + nagent_review)
- guide_architecture.md    (+ new See Also section listing all 10
                           guides + nagent_review report)
- guide_ai_client.md       (+ See Also entries for state lifecycle,
                           context aggregation, nagent_review
                           pitfalls #2 and #4)
- guide_mma.md             (+ new See Also section pointing to
                           context aggregation, discussions,
                           nagent_review report §9 + takeaways §3/§10
                           for SubConversationRunner priority)
- guide_models.md          (+ See Also entries for context
                           aggregation, discussions, nagent_review
                           report §6 on FileItem as strongest
                           curation dimension)
- Readme.md                (+ 3 new guide entries in the index
                           table, with one-line summaries)

No code modified. This is documentation only.

Why these 3 guides specifically:

- guide_discussions.md: The discussion system is the user's most
  edited surface. nagent_review's report §3 enumerated 23 operations
  (A1-C5) that previously existed only as scattered file:line refs
  across gui_2.py. A dedicated guide makes the operation matrix
  discoverable.

- guide_state_lifecycle.md: The undo/redo + reset + state delegation
  machinery is architecturally load-bearing but scattered across 4
  files. After nagent_review identified the provider-side history
  divergence as Pitfall #4, the relationship between Manual Slop's
  state and the provider's state needs explicit documentation.

- guide_context_aggregation.md: aggregate.py (518 lines) is the
  most-touched module after ai_client.py but had no dedicated
  guide. nagent_review confirmed it's Manual Slop's strongest
  curation dimension. A dedicated guide makes the 7 view modes
  and 3 strategies discoverable.

The 3 new guides total 1,122 lines and follow the existing
per-source-file deep-dive style (architectural, data-oriented,
state-management-focused).
2026-06-08 19:26:08 -04:00
ed 0426239a13 docs(ai-client): add guide_ai_client.md 2026-06-02 23:25:28 -04:00