chore(conductor): Archive strategic overview and split into granular tracks

conductor/archive/code_path_analysis_20260507/plan.md

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+# Implementation Plan: Code Path & Data Pipeline Analysis (code_path_analysis_20260507)
+
+## Phase 1: Structural Exploration & Tooling Setup
+- [x] Task: Initialize `PIPELINE_ANALYSIS.md` template.
+- [x] Task: Deploy `codebase_investigator` subagents to identify top-level entry points in `gui_2.py` and `simulation/`.
+- [x] Task: Verify usage of existing tree-sitter tools to generate initial call-graph skeletons for `./src`.
+- [x] Task: Conductor - User Manual Verification 'Phase 1' (Protocol in workflow.md)
+
+## Phase 2: Mapping Core Source Pipelines (`./src`)
+- [x] Task: Map the **Context Aggregation Pipeline** (`aggregate.py`, `models.py`).
+- [x] Task: Map the **AI Interaction Loop** (`ai_client.py`, `mcp_client.py`, `shell_runner.py`).
+- [x] Task: Map the **GUI Event & State Pipeline** (`gui_2.py`, `app_controller.py`).
+- [x] Task: Document data responsibilities and state boundaries for each route.
+- [x] Task: Conductor - User Manual Verification 'Phase 2' (Protocol in workflow.md)
+
+## Phase 3: Mapping Simulation Pipelines (`./simulation`)
+- [x] Task: Map the **Simulation Lifecycle** (`sim_base.py`, `sim_context.py`, `workflow_sim.py`).
+- [x] Task: Analyze data flow between `sim_ai_settings.py` and the execution engine.
+- [x] Task: Document the "Verification & Checkpointing" route in simulations.
+- [x] Task: Conductor - User Manual Verification 'Phase 3' (Protocol in workflow.md)
+
+## Phase 4: Synthesis & Reporting
+- [x] Task: Consolidate all findings into Mermaid diagrams within `PIPELINE_ANALYSIS.md`.
+- [x] Task: Identify specific "Curation Targets" (redundancies, style violations) for the next track.
+- [x] Task: Final review and hand-off to Track 2 (Codebase Curation).
+- [x] Task: Conductor - User Manual Verification 'Phase 4' (Protocol in workflow.md)