gemini quota exhausted: fixing regressions in test suite
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# Plan: Fix Test Suite Regressions
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## Objective
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Restore the full test suite to a passing state after the `gui_2.py` refactoring (Phase 2 & Phase 3 of Context Composition Redesign).
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## Key Files & Context
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- `src/gui_2.py`: The main GUI entry point where methods were moved to module level.
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- `src/hot_reloader.py`: Handles module registration, currently causing collisions in tests.
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- `tests/*.py`: Multiple test files referencing deleted/moved methods.
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## Implementation Steps
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### Phase 1: Fix HotReloader Collisions
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- [ ] Modify `src/gui_2.py` to check if `src.gui_2` is already registered before calling `HotReloader.register`. This allows multiple `App()` instances (common in tests) without triggering `ValueError`.
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- [ ] Revert `src/hot_reloader.py` to its original state (raising `ValueError` on duplicate registration) to satisfy existing tests for that logic.
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### Phase 2: Fix Method Migration Regressions (Batch)
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- [ ] Identify all test files calling `app._render_*` or checking `hasattr(App, '_render_*')`.
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- [ ] Use Tier 3 workers to surgically update these tests:
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- Change `app._render_XYZ()` to `gui_2.render_XYZ(app)`.
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- Change `hasattr(App, '_render_XYZ')` to `hasattr(gui_2, 'render_XYZ')` (and import `gui_2`).
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- Note: Some internal helpers might still be prefixed with `_` at the module level.
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- [ ] Target the following specific files:
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- `tests/test_ast_inspector_extended.py`
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- `tests/test_discussion_takes_gui.py`
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- `tests/test_gui_discussion_tabs.py`
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- `tests/test_gui_fast_render.py`
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- `tests/test_gui_phase4.py`
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- `tests/test_gui_progress.py`
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- `tests/test_gui_symbol_navigation.py`
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- `tests/test_gui_synthesis.py`
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- `tests/test_log_management_ui.py`
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- `tests/test_mma_approval_indicators.py`
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- `tests/test_mma_dashboard_streams.py`
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- `tests/test_project_settings_rename.py`
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- `tests/test_rag_gui_presence.py`
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- `tests/test_selectable_ui.py`
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- `tests/test_session_hub_merge.py`
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- `tests/test_shader_live_editor.py`
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- `tests/test_takes_panel.py`
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- `tests/test_thinking_gui.py`
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- `tests/test_token_viz.py`
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- `tests/test_ui_summary_only_removal.py`
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### Phase 3: Address Specific Logic Failures
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- [ ] `tests/test_py_struct_tools.py`: Investigate and fix why definitions are not found.
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- [ ] `tests/test_rag_phase4_final_verify.py`: Investigate why RAG context is missing in history.
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- [ ] `tests/test_rag_phase4_stress.py`: Investigate timing issues (incremental indexing duration).
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- [ ] `tests/test_gui_kill_button.py`: Investigate missing "Actions" column in ticket queue.
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## Verification & Testing
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- [ ] Run the full test suite using the batch script: `uv run python scripts/run_tests_batched.py`.
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- [ ] Ensure all 243 test files pass.
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