fix(gui): fix missing thinking_segments parameter persistence across sessions

src/models.py

@@ -111,6 +111,7 @@ DEFAULT_TOOL_CATEGORIES: Dict[str, List[str]] = {
 
 def parse_history_entries(history_strings: list[str], roles: list[str]) -> list[dict[str, Any]]:
  import re
+ from src import thinking_parser
  entries = []
  for raw in history_strings:
   ts = ""
@@ -128,7 +129,15 @@ def parse_history_entries(history_strings: list[str], roles: list[str]) -> list[
    content = rest[match.end():].strip()
   else:
    content = rest
-  entries.append({"role": role, "content": content, "collapsed": True, "ts": ts})
+   
+  entry_obj = {"role": role, "content": content, "collapsed": True, "ts": ts}
+  if role == "AI" and ("<thinking>" in content or "<thought>" in content or "Thinking:" in content):
+   segments, parsed_content = thinking_parser.parse_thinking_trace(content)
+   if segments:
+    entry_obj["content"] = parsed_content
+    entry_obj["thinking_segments"] = [{"content": s.content, "marker": s.marker} for s in segments]
+    
+  entries.append(entry_obj)
  return entries
 
 @dataclass

src/project_manager.py

@@ -33,6 +33,14 @@ def entry_to_str(entry: dict[str, Any]) -> str:
  ts = entry.get("ts", "")
  role = entry.get("role", "User")
  content = entry.get("content", "")
+ 
+ segments = entry.get("thinking_segments")
+ if segments:
+  for s in segments:
+   marker = s.get("marker", "thinking")
+   s_content = s.get("content", "")
+   content = f"<{marker}>\n{s_content}\n</{marker}>\n{content}"
+   
  if ts:
   return f"@{ts}\n{role}:\n{content}"
  return f"{role}:\n{content}"